STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM24994.1Sugar (D-ribose) ABC transporter, periplasmic sugar-binding protein; COG1879 ABC-type sugar transport system, periplasmic component. (236 aa)    
Predicted Functional Partners:
radC
DNA repair protein RadC; COG2198 FOG: HPt domain.
   
 0.970
EDM25123.1
Periplasmic Sensor Hybrid Histidine Kinase; COG0642 Signal transduction histidine kinase.
   
 0.967
EDM25580.1
Transcriptional regulator; COG0642 Signal transduction histidine kinase.
   
 0.967
EDM26367.1
COG0642 Signal transduction histidine kinase.
   
 0.965
EDM25049.1
Two-component hybrid sensor and regulator; COG0784 FOG: CheY-like receiver.
   
 0.964
EDM26434.1
Sensor histidine kinase/response regulator; COG0642 Signal transduction histidine kinase.
   
 0.957
EDM25048.1
Hypothetical protein; COG0642 Signal transduction histidine kinase.
    
 0.953
EDM26896.1
Hypothetical protein; COG0642 Signal transduction histidine kinase.
    
 0.953
EDM25554.1
Sugar ABC transporter permease protein; COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components.
 
 0.946
EDM28145.1
Probable sugar transporter permease protein; COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components.
 
 0.946
Your Current Organism:
Lentisphaera araneosa
NCBI taxonomy Id: 313628
Other names: L. araneosa HTCC2155, Lentisphaera araneosa HTCC2155, Lentisphaera araneosa str. HTCC2155, Lentisphaera araneosa strain HTCC2155
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.