STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM25553.1Sugar ABC transporter ATP-binding protein; COG1129 ABC-type sugar transport system, ATPase component. (492 aa)    
Predicted Functional Partners:
EDM25554.1
Sugar ABC transporter permease protein; COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components.
 0.993
EDM28145.1
Probable sugar transporter permease protein; COG1172 Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components.
 0.991
EDM24994.1
Sugar (D-ribose) ABC transporter, periplasmic sugar-binding protein; COG1879 ABC-type sugar transport system, periplasmic component.
 
 0.944
EDM28143.1
Periplasmic binding protein/LacI transcriptional regulator; COG1879 ABC-type sugar transport system, periplasmic component.
 
 0.944
EDM28764.1
Predicted cytoplasmic sugar-binding protein; Catalyzes the interconversion of beta-pyran and beta-furan forms of D-ribose.
 
  
 0.891
EDM25552.1
Hypothetical protein; COG0492 Thioredoxin reductase.
       0.773
EDM25015.1
Hypothetical protein; COG1609 Transcriptional regulators.
  
 
  0.429
EDM26545.1
Putative maltose operon transcriptional repressor; COG1609 Transcriptional regulators.
  
 
  0.413
Your Current Organism:
Lentisphaera araneosa
NCBI taxonomy Id: 313628
Other names: L. araneosa HTCC2155, Lentisphaera araneosa HTCC2155, Lentisphaera araneosa str. HTCC2155, Lentisphaera araneosa strain HTCC2155
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.