STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM25561.1Hypothetical protein; COG3622 Hydroxypyruvate isomerase. (308 aa)    
Predicted Functional Partners:
EDM25562.1
Hypothetical protein; COG2133 Glucose/sorbosone dehydrogenases.
 
     0.802
EDM25250.1
Probable oxidoreductase; COG0673 Predicted dehydrogenases and related proteins.
  
 
  0.774
EDM25563.1
N-acetylgalactosamine 6-sulfatase (GALNS); COG3119 Arylsulfatase A and related enzymes.
       0.741
EDM26682.1
Probable lipopolysaccharide biosynthesis protein BplA-putative NADH-dependent oxidoreductase; COG0673 Predicted dehydrogenases and related proteins.
  
 
  0.658
EDM25402.1
Hypothetical protein.
  
     0.608
EDM29240.1
Hypothetical protein.
  
     0.565
EDM27974.1
Hypothetical protein; COG3622 Hydroxypyruvate isomerase.
  
  
  0.538
EDM25107.1
Hypothetical protein.
  
     0.536
EDM27538.1
Hypothetical protein; COG0495 Leucyl-tRNA synthetase.
  
     0.523
EDM27712.1
Probable secreted glycosyl hydrolase.
  
     0.505
Your Current Organism:
Lentisphaera araneosa
NCBI taxonomy Id: 313628
Other names: L. araneosa HTCC2155, Lentisphaera araneosa HTCC2155, Lentisphaera araneosa str. HTCC2155, Lentisphaera araneosa strain HTCC2155
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.