Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EDM24992.1 | EDM25397.1 | LNTAR_08001 | LNTAR_09696 | Hypothetical protein. | Hypothetical protein; COG0372 Citrate synthase. | 0.478 |
EDM24992.1 | EDM26777.1 | LNTAR_08001 | LNTAR_19060 | Hypothetical protein. | Hypothetical protein. | 0.443 |
EDM24992.1 | EDM28419.1 | LNTAR_08001 | LNTAR_10901 | Hypothetical protein. | Hypothetical protein. | 0.605 |
EDM24992.1 | EDM28578.1 | LNTAR_08001 | LNTAR_08414 | Hypothetical protein. | Probable RNA polymerase sigma-H factor; COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog; Belongs to the sigma-70 factor family. ECF subfamily. | 0.590 |
EDM25397.1 | EDM24992.1 | LNTAR_09696 | LNTAR_08001 | Hypothetical protein; COG0372 Citrate synthase. | Hypothetical protein. | 0.478 |
EDM25397.1 | EDM26578.1 | LNTAR_09696 | LNTAR_02182 | Hypothetical protein; COG0372 Citrate synthase. | Hypothetical protein; COG1520 FOG: WD40-like repeat. | 0.594 |
EDM25397.1 | EDM27784.1 | LNTAR_09696 | LNTAR_00245 | Hypothetical protein; COG0372 Citrate synthase. | Probable 4-hydroxybenzoyl-CoA thioesterase; COG0824 Predicted thioesterase. | 0.491 |
EDM25397.1 | EDM28578.1 | LNTAR_09696 | LNTAR_08414 | Hypothetical protein; COG0372 Citrate synthase. | Probable RNA polymerase sigma-H factor; COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog; Belongs to the sigma-70 factor family. ECF subfamily. | 0.637 |
EDM26578.1 | EDM25397.1 | LNTAR_02182 | LNTAR_09696 | Hypothetical protein; COG1520 FOG: WD40-like repeat. | Hypothetical protein; COG0372 Citrate synthase. | 0.594 |
EDM26578.1 | EDM26777.1 | LNTAR_02182 | LNTAR_19060 | Hypothetical protein; COG1520 FOG: WD40-like repeat. | Hypothetical protein. | 0.764 |
EDM26578.1 | EDM28419.1 | LNTAR_02182 | LNTAR_10901 | Hypothetical protein; COG1520 FOG: WD40-like repeat. | Hypothetical protein. | 0.650 |
EDM26578.1 | EDM28578.1 | LNTAR_02182 | LNTAR_08414 | Hypothetical protein; COG1520 FOG: WD40-like repeat. | Probable RNA polymerase sigma-H factor; COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog; Belongs to the sigma-70 factor family. ECF subfamily. | 0.736 |
EDM26578.1 | EDM28692.1 | LNTAR_02182 | LNTAR_08984 | Hypothetical protein; COG1520 FOG: WD40-like repeat. | Probable vegetatible incompatibility protein HET-E-1. | 0.656 |
EDM26777.1 | EDM24992.1 | LNTAR_19060 | LNTAR_08001 | Hypothetical protein. | Hypothetical protein. | 0.443 |
EDM26777.1 | EDM26578.1 | LNTAR_19060 | LNTAR_02182 | Hypothetical protein. | Hypothetical protein; COG1520 FOG: WD40-like repeat. | 0.764 |
EDM26777.1 | EDM27784.1 | LNTAR_19060 | LNTAR_00245 | Hypothetical protein. | Probable 4-hydroxybenzoyl-CoA thioesterase; COG0824 Predicted thioesterase. | 0.484 |
EDM26777.1 | EDM28578.1 | LNTAR_19060 | LNTAR_08414 | Hypothetical protein. | Probable RNA polymerase sigma-H factor; COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog; Belongs to the sigma-70 factor family. ECF subfamily. | 0.728 |
EDM27784.1 | EDM25397.1 | LNTAR_00245 | LNTAR_09696 | Probable 4-hydroxybenzoyl-CoA thioesterase; COG0824 Predicted thioesterase. | Hypothetical protein; COG0372 Citrate synthase. | 0.491 |
EDM27784.1 | EDM26777.1 | LNTAR_00245 | LNTAR_19060 | Probable 4-hydroxybenzoyl-CoA thioesterase; COG0824 Predicted thioesterase. | Hypothetical protein. | 0.484 |
EDM27784.1 | EDM28419.1 | LNTAR_00245 | LNTAR_10901 | Probable 4-hydroxybenzoyl-CoA thioesterase; COG0824 Predicted thioesterase. | Hypothetical protein. | 0.582 |
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