Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EDM28594.1 | EDM28595.1 | LNTAR_08494 | LNTAR_08499 | Transcriptional regulator, AraC family protein; COG2207 AraC-type DNA-binding domain-containing proteins. | Probable peptide chain release factor 3; Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF-1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. PrfC subfamily. | 0.498 |
| EDM28594.1 | EDM28596.1 | LNTAR_08494 | LNTAR_08504 | Transcriptional regulator, AraC family protein; COG2207 AraC-type DNA-binding domain-containing proteins. | Hypothetical protein. | 0.498 |
| EDM28595.1 | EDM28594.1 | LNTAR_08499 | LNTAR_08494 | Probable peptide chain release factor 3; Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF-1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. PrfC subfamily. | Transcriptional regulator, AraC family protein; COG2207 AraC-type DNA-binding domain-containing proteins. | 0.498 |
| EDM28595.1 | EDM28596.1 | LNTAR_08499 | LNTAR_08504 | Probable peptide chain release factor 3; Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF-1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. PrfC subfamily. | Hypothetical protein. | 0.773 |
| EDM28595.1 | EDM28597.1 | LNTAR_08499 | LNTAR_08509 | Probable peptide chain release factor 3; Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF-1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. PrfC subfamily. | Sugar isomerase, KpsF/GutQ family protein; COG0794 Predicted sugar phosphate isomerase involved in capsule formation; Belongs to the SIS family. GutQ/KpsF subfamily. | 0.511 |
| EDM28595.1 | EDM28598.1 | LNTAR_08499 | LNTAR_08514 | Probable peptide chain release factor 3; Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF-1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. PrfC subfamily. | COG0515 Serine/threonine protein kinase. | 0.458 |
| EDM28595.1 | EDM28599.1 | LNTAR_08499 | LNTAR_08519 | Probable peptide chain release factor 3; Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF-1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. PrfC subfamily. | COG4696 Uncharacterized protein conserved in bacteria. | 0.458 |
| EDM28596.1 | EDM28594.1 | LNTAR_08504 | LNTAR_08494 | Hypothetical protein. | Transcriptional regulator, AraC family protein; COG2207 AraC-type DNA-binding domain-containing proteins. | 0.498 |
| EDM28596.1 | EDM28595.1 | LNTAR_08504 | LNTAR_08499 | Hypothetical protein. | Probable peptide chain release factor 3; Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF-1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. PrfC subfamily. | 0.773 |
| EDM28596.1 | EDM28597.1 | LNTAR_08504 | LNTAR_08509 | Hypothetical protein. | Sugar isomerase, KpsF/GutQ family protein; COG0794 Predicted sugar phosphate isomerase involved in capsule formation; Belongs to the SIS family. GutQ/KpsF subfamily. | 0.497 |
| EDM28596.1 | EDM28598.1 | LNTAR_08504 | LNTAR_08514 | Hypothetical protein. | COG0515 Serine/threonine protein kinase. | 0.458 |
| EDM28596.1 | EDM28599.1 | LNTAR_08504 | LNTAR_08519 | Hypothetical protein. | COG4696 Uncharacterized protein conserved in bacteria. | 0.458 |
| EDM28597.1 | EDM28595.1 | LNTAR_08509 | LNTAR_08499 | Sugar isomerase, KpsF/GutQ family protein; COG0794 Predicted sugar phosphate isomerase involved in capsule formation; Belongs to the SIS family. GutQ/KpsF subfamily. | Probable peptide chain release factor 3; Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF-1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. PrfC subfamily. | 0.511 |
| EDM28597.1 | EDM28596.1 | LNTAR_08509 | LNTAR_08504 | Sugar isomerase, KpsF/GutQ family protein; COG0794 Predicted sugar phosphate isomerase involved in capsule formation; Belongs to the SIS family. GutQ/KpsF subfamily. | Hypothetical protein. | 0.497 |
| EDM28597.1 | EDM28598.1 | LNTAR_08509 | LNTAR_08514 | Sugar isomerase, KpsF/GutQ family protein; COG0794 Predicted sugar phosphate isomerase involved in capsule formation; Belongs to the SIS family. GutQ/KpsF subfamily. | COG0515 Serine/threonine protein kinase. | 0.705 |
| EDM28597.1 | EDM28599.1 | LNTAR_08509 | LNTAR_08519 | Sugar isomerase, KpsF/GutQ family protein; COG0794 Predicted sugar phosphate isomerase involved in capsule formation; Belongs to the SIS family. GutQ/KpsF subfamily. | COG4696 Uncharacterized protein conserved in bacteria. | 0.705 |
| EDM28598.1 | EDM28595.1 | LNTAR_08514 | LNTAR_08499 | COG0515 Serine/threonine protein kinase. | Probable peptide chain release factor 3; Increases the formation of ribosomal termination complexes and stimulates activities of RF-1 and RF-2. It binds guanine nucleotides and has strong preference for UGA stop codons. It may interact directly with the ribosome. The stimulation of RF-1 and RF-2 is significantly reduced by GTP and GDP, but not by GMP. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. PrfC subfamily. | 0.458 |
| EDM28598.1 | EDM28596.1 | LNTAR_08514 | LNTAR_08504 | COG0515 Serine/threonine protein kinase. | Hypothetical protein. | 0.458 |
| EDM28598.1 | EDM28597.1 | LNTAR_08514 | LNTAR_08509 | COG0515 Serine/threonine protein kinase. | Sugar isomerase, KpsF/GutQ family protein; COG0794 Predicted sugar phosphate isomerase involved in capsule formation; Belongs to the SIS family. GutQ/KpsF subfamily. | 0.705 |
| EDM28598.1 | EDM28599.1 | LNTAR_08514 | LNTAR_08519 | COG0515 Serine/threonine protein kinase. | COG4696 Uncharacterized protein conserved in bacteria. | 0.773 |
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