STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM28644.1Hypothetical protein; COG0577 ABC-type antimicrobial peptide transport system, permease component. (445 aa)    
Predicted Functional Partners:
EDM28643.1
ABC transporter, probable ATP-binding subunit; COG1136 ABC-type antimicrobial peptide transport system, ATPase component.
 
  0.939
EDM28642.1
Molybdate-binding periplasmic protein; COG0725 ABC-type molybdate transport system, periplasmic component.
 
     0.933
EDM28645.1
Hypothetical protein; COG1520 FOG: WD40-like repeat.
 
     0.911
EDM28646.1
Hypothetical protein; COG1520 FOG: WD40-like repeat.
 
     0.911
EDM25350.1
Transmembrane ATP-binding ABC transporter protein; COG1136 ABC-type antimicrobial peptide transport system, ATPase component; Belongs to the ABC transporter superfamily. Macrolide exporter (TC 3.A.1.122) family.
  
 0.881
EDM28641.1
COG0555 ABC-type sulfate transport system, permease component.
 
     0.824
EDM28639.1
Hypothetical protein; COG1977 Molybdopterin converting factor, small subunit.
       0.773
EDM28640.1
Putative multiple sugar transport protein; COG3839 ABC-type sugar transport systems, ATPase components.
       0.773
EDM28127.1
ABC transporter, ATPase subunit; COG1136 ABC-type antimicrobial peptide transport system, ATPase component.
  
  0.734
EDM29246.1
Hypothetical protein; COG0412 Dienelactone hydrolase and related enzymes.
  
     0.703
Your Current Organism:
Lentisphaera araneosa
NCBI taxonomy Id: 313628
Other names: L. araneosa HTCC2155, Lentisphaera araneosa HTCC2155, Lentisphaera araneosa str. HTCC2155, Lentisphaera araneosa strain HTCC2155
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.