STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM28712.1Cellulase precursor. (596 aa)    
Predicted Functional Partners:
EDM28714.1
3-hydroxyacyl-CoA dehydrogenase; COG2730 Endoglucanase; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
 
  
  0.939
EDM25033.1
Cellulose-binding, family II, bacterial type; COG2730 Endoglucanase; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
  
  
  0.771
EDM28713.1
N-acetylgalactosamine 6-sulfatase (GALNS); COG3119 Arylsulfatase A and related enzymes.
       0.762
EDM26428.1
Endo-1,4-beta-xylanase; COG3693 Beta-1,4-xylanase.
  
     0.630
EDM29603.1
Endo-1,4-beta-xylanase; COG3693 Beta-1,4-xylanase.
  
     0.623
EDM27328.1
Hypothetical protein.
  
     0.594
EDM29027.1
COG3459 Cellobiose phosphorylase.
  
  
  0.586
EDM27137.1
Glycosyl hydrolase, family 10; COG3693 Beta-1,4-xylanase.
  
     0.571
EDM26022.1
Mannan endo-1,4-beta-mannosidase precursor; Belongs to the glycosyl hydrolase 26 family.
  
  
  0.566
EDM26432.1
Alpha-L-arabinofuranosidase; COG3507 Beta-xylosidase; Belongs to the glycosyl hydrolase 43 family.
  
     0.562
Your Current Organism:
Lentisphaera araneosa
NCBI taxonomy Id: 313628
Other names: L. araneosa HTCC2155, Lentisphaera araneosa HTCC2155, Lentisphaera araneosa str. HTCC2155, Lentisphaera araneosa strain HTCC2155
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.