STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM28725.1Hypothetical protein. (272 aa)    
Predicted Functional Partners:
EDM28726.1
Phytanoyl-CoA dioxygenase; COG5285 Protein involved in biosynthesis of mitomycin antibiotics/polyketide fumonisin.
 
     0.751
EDM28727.1
Hypothetical protein; COG2207 AraC-type DNA-binding domain-containing proteins.
       0.507
EDM29502.1
Para-aminobenzoate synthetase, putative; COG0147 Anthranilate/para-aminobenzoate synthases component I.
    
  0.503
EDM26384.1
Probable chromosome segregation protein.
  
     0.457
EDM28733.1
Hypothetical protein; COG3525 N-acetyl-beta-hexosaminidase.
 
     0.418
EDM28728.1
Hypothetical protein; COG0673 Predicted dehydrogenases and related proteins.
  
 
  0.406
Your Current Organism:
Lentisphaera araneosa
NCBI taxonomy Id: 313628
Other names: L. araneosa HTCC2155, Lentisphaera araneosa HTCC2155, Lentisphaera araneosa str. HTCC2155, Lentisphaera araneosa strain HTCC2155
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.