STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM28762.1Beta-glucuronidase; COG3250 Beta-galactosidase/beta-glucuronidase; Belongs to the glycosyl hydrolase 2 family. (608 aa)    
Predicted Functional Partners:
EDM28761.1
Oxidoreductase, putative; COG0673 Predicted dehydrogenases and related proteins.
 
  
  0.806
EDM29455.1
Hypothetical protein; COG3534 Alpha-L-arabinofuranosidase.
 
 
 0.636
EDM28763.1
Arabinofuranosidase; COG3507 Beta-xylosidase; Belongs to the glycosyl hydrolase 43 family.
 
  
  0.626
EDM27297.1
COG3345 Alpha-galactosidase.
  
  
  0.602
EDM28593.1
Sugar kinase; COG1940 Transcriptional regulator/sugar kinase.
    
 0.589
EDM25017.1
COG0153 Galactokinase; Belongs to the GHMP kinase family. GalK subfamily.
  
  
 0.560
EDM28760.1
COG3055 Uncharacterized protein conserved in bacteria.
 
     0.528
EDM28759.1
Short chain dehydrogenase; COG1028 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases).
  
 
  0.497
EDM27599.1
Hypothetical protein; COG2731 Beta-galactosidase, beta subunit.
    
  0.476
EDM28526.1
Glycoside hydrolase, clan GH-D; COG3345 Alpha-galactosidase.
  
  
  0.408
Your Current Organism:
Lentisphaera araneosa
NCBI taxonomy Id: 313628
Other names: L. araneosa HTCC2155, Lentisphaera araneosa HTCC2155, Lentisphaera araneosa str. HTCC2155, Lentisphaera araneosa strain HTCC2155
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.