STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM28768.1COG0591 Na+/proline symporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family. (671 aa)    
Predicted Functional Partners:
EDM28769.1
COG1629 Outer membrane receptor proteins, mostly Fe transport.
 
     0.812
EDM26400.1
COG0591 Na+/proline symporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
 
     0.744
EDM24982.1
Sodium/glucose cotransporter 2; COG4146 Predicted symporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
  
     0.743
EDM28767.1
Hypothetical protein; COG1045 Serine acetyltransferase.
 
     0.712
EDM27988.1
Na+/glucose cotransporter; COG4146 Predicted symporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
  
     0.704
EDM24970.1
COG0591 Na+/proline symporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
 
     0.692
EDM28766.1
Hypothetical protein; COG1609 Transcriptional regulators.
 
     0.634
EDM28770.1
Hypothetical protein; COG0383 Alpha-mannosidase.
 
     0.532
acsA
Acetate--CoA ligase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA; Belongs to the ATP-dependent AMP-binding enzyme family.
  
  
 0.517
EDM27735.1
COG1757 Na+/H+ antiporter.
  
     0.459
Your Current Organism:
Lentisphaera araneosa
NCBI taxonomy Id: 313628
Other names: L. araneosa HTCC2155, Lentisphaera araneosa HTCC2155, Lentisphaera araneosa str. HTCC2155, Lentisphaera araneosa strain HTCC2155
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.