Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| EDM25033.1 | EDM27137.1 | LNTAR_01767 | LNTAR_15747 | Cellulose-binding, family II, bacterial type; COG2730 Endoglucanase; Belongs to the glycosyl hydrolase 5 (cellulase A) family. | Glycosyl hydrolase, family 10; COG3693 Beta-1,4-xylanase. | 0.427 |
| EDM25033.1 | EDM27328.1 | LNTAR_01767 | LNTAR_21480 | Cellulose-binding, family II, bacterial type; COG2730 Endoglucanase; Belongs to the glycosyl hydrolase 5 (cellulase A) family. | Hypothetical protein. | 0.781 |
| EDM25033.1 | EDM28712.1 | LNTAR_01767 | LNTAR_09084 | Cellulose-binding, family II, bacterial type; COG2730 Endoglucanase; Belongs to the glycosyl hydrolase 5 (cellulase A) family. | Cellulase precursor. | 0.771 |
| EDM25033.1 | EDM28803.1 | LNTAR_01767 | LNTAR_09539 | Cellulose-binding, family II, bacterial type; COG2730 Endoglucanase; Belongs to the glycosyl hydrolase 5 (cellulase A) family. | Cellulose-binding, family II, bacterial type; COG2755 Lysophospholipase L1 and related esterases. | 0.611 |
| EDM25539.1 | EDM28803.1 | LNTAR_23759 | LNTAR_09539 | Probable lipase/esterase; COG0657 Esterase/lipase. | Cellulose-binding, family II, bacterial type; COG2755 Lysophospholipase L1 and related esterases. | 0.777 |
| EDM26432.1 | EDM27137.1 | LNTAR_05639 | LNTAR_15747 | Alpha-L-arabinofuranosidase; COG3507 Beta-xylosidase; Belongs to the glycosyl hydrolase 43 family. | Glycosyl hydrolase, family 10; COG3693 Beta-1,4-xylanase. | 0.585 |
| EDM26432.1 | EDM27328.1 | LNTAR_05639 | LNTAR_21480 | Alpha-L-arabinofuranosidase; COG3507 Beta-xylosidase; Belongs to the glycosyl hydrolase 43 family. | Hypothetical protein. | 0.956 |
| EDM26432.1 | EDM28712.1 | LNTAR_05639 | LNTAR_09084 | Alpha-L-arabinofuranosidase; COG3507 Beta-xylosidase; Belongs to the glycosyl hydrolase 43 family. | Cellulase precursor. | 0.562 |
| EDM26432.1 | EDM28714.1 | LNTAR_05639 | LNTAR_09094 | Alpha-L-arabinofuranosidase; COG3507 Beta-xylosidase; Belongs to the glycosyl hydrolase 43 family. | 3-hydroxyacyl-CoA dehydrogenase; COG2730 Endoglucanase; Belongs to the glycosyl hydrolase 5 (cellulase A) family. | 0.476 |
| EDM26432.1 | EDM28803.1 | LNTAR_05639 | LNTAR_09539 | Alpha-L-arabinofuranosidase; COG3507 Beta-xylosidase; Belongs to the glycosyl hydrolase 43 family. | Cellulose-binding, family II, bacterial type; COG2755 Lysophospholipase L1 and related esterases. | 0.473 |
| EDM26432.1 | EDM29455.1 | LNTAR_05639 | LNTAR_16933 | Alpha-L-arabinofuranosidase; COG3507 Beta-xylosidase; Belongs to the glycosyl hydrolase 43 family. | Hypothetical protein; COG3534 Alpha-L-arabinofuranosidase. | 0.762 |
| EDM27137.1 | EDM25033.1 | LNTAR_15747 | LNTAR_01767 | Glycosyl hydrolase, family 10; COG3693 Beta-1,4-xylanase. | Cellulose-binding, family II, bacterial type; COG2730 Endoglucanase; Belongs to the glycosyl hydrolase 5 (cellulase A) family. | 0.427 |
| EDM27137.1 | EDM26432.1 | LNTAR_15747 | LNTAR_05639 | Glycosyl hydrolase, family 10; COG3693 Beta-1,4-xylanase. | Alpha-L-arabinofuranosidase; COG3507 Beta-xylosidase; Belongs to the glycosyl hydrolase 43 family. | 0.585 |
| EDM27137.1 | EDM27328.1 | LNTAR_15747 | LNTAR_21480 | Glycosyl hydrolase, family 10; COG3693 Beta-1,4-xylanase. | Hypothetical protein. | 0.535 |
| EDM27137.1 | EDM28712.1 | LNTAR_15747 | LNTAR_09084 | Glycosyl hydrolase, family 10; COG3693 Beta-1,4-xylanase. | Cellulase precursor. | 0.571 |
| EDM27137.1 | EDM28714.1 | LNTAR_15747 | LNTAR_09094 | Glycosyl hydrolase, family 10; COG3693 Beta-1,4-xylanase. | 3-hydroxyacyl-CoA dehydrogenase; COG2730 Endoglucanase; Belongs to the glycosyl hydrolase 5 (cellulase A) family. | 0.489 |
| EDM27137.1 | EDM28803.1 | LNTAR_15747 | LNTAR_09539 | Glycosyl hydrolase, family 10; COG3693 Beta-1,4-xylanase. | Cellulose-binding, family II, bacterial type; COG2755 Lysophospholipase L1 and related esterases. | 0.463 |
| EDM27137.1 | EDM29455.1 | LNTAR_15747 | LNTAR_16933 | Glycosyl hydrolase, family 10; COG3693 Beta-1,4-xylanase. | Hypothetical protein; COG3534 Alpha-L-arabinofuranosidase. | 0.593 |
| EDM27328.1 | EDM25033.1 | LNTAR_21480 | LNTAR_01767 | Hypothetical protein. | Cellulose-binding, family II, bacterial type; COG2730 Endoglucanase; Belongs to the glycosyl hydrolase 5 (cellulase A) family. | 0.781 |
| EDM27328.1 | EDM26432.1 | LNTAR_21480 | LNTAR_05639 | Hypothetical protein. | Alpha-L-arabinofuranosidase; COG3507 Beta-xylosidase; Belongs to the glycosyl hydrolase 43 family. | 0.956 |
page 1 of 3