Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EDM25250.1 | EDM25891.1 | LNTAR_24763 | LNTAR_07609 | Probable oxidoreductase; COG0673 Predicted dehydrogenases and related proteins. | Hypothetical protein; COG2133 Glucose/sorbosone dehydrogenases. | 0.593 |
EDM25250.1 | EDM26603.1 | LNTAR_24763 | LNTAR_02307 | Probable oxidoreductase; COG0673 Predicted dehydrogenases and related proteins. | Probable secreted glycosyl hydrolase. | 0.654 |
EDM25250.1 | EDM27538.1 | LNTAR_24763 | LNTAR_05481 | Probable oxidoreductase; COG0673 Predicted dehydrogenases and related proteins. | Hypothetical protein; COG0495 Leucyl-tRNA synthetase. | 0.747 |
EDM25250.1 | EDM28403.1 | LNTAR_24763 | LNTAR_10821 | Probable oxidoreductase; COG0673 Predicted dehydrogenases and related proteins. | COG0095 Lipoate-protein ligase A. | 0.735 |
EDM25250.1 | EDM28435.1 | LNTAR_24763 | LNTAR_10981 | Probable oxidoreductase; COG0673 Predicted dehydrogenases and related proteins. | Hypothetical protein. | 0.765 |
EDM25250.1 | EDM29301.1 | LNTAR_24763 | LNTAR_22964 | Probable oxidoreductase; COG0673 Predicted dehydrogenases and related proteins. | Hypothetical protein; COG1109 Phosphomannomutase. | 0.472 |
EDM25250.1 | EDM29498.1 | LNTAR_24763 | LNTAR_17148 | Probable oxidoreductase; COG0673 Predicted dehydrogenases and related proteins. | Hypothetical protein; COG2133 Glucose/sorbosone dehydrogenases. | 0.643 |
EDM25891.1 | EDM25250.1 | LNTAR_07609 | LNTAR_24763 | Hypothetical protein; COG2133 Glucose/sorbosone dehydrogenases. | Probable oxidoreductase; COG0673 Predicted dehydrogenases and related proteins. | 0.593 |
EDM25891.1 | EDM26682.1 | LNTAR_07609 | LNTAR_18585 | Hypothetical protein; COG2133 Glucose/sorbosone dehydrogenases. | Probable lipopolysaccharide biosynthesis protein BplA-putative NADH-dependent oxidoreductase; COG0673 Predicted dehydrogenases and related proteins. | 0.424 |
EDM25891.1 | EDM28403.1 | LNTAR_07609 | LNTAR_10821 | Hypothetical protein; COG2133 Glucose/sorbosone dehydrogenases. | COG0095 Lipoate-protein ligase A. | 0.619 |
EDM25891.1 | EDM28434.1 | LNTAR_07609 | LNTAR_10976 | Hypothetical protein; COG2133 Glucose/sorbosone dehydrogenases. | Hypothetical protein; COG1506 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases. | 0.493 |
EDM25891.1 | EDM28435.1 | LNTAR_07609 | LNTAR_10981 | Hypothetical protein; COG2133 Glucose/sorbosone dehydrogenases. | Hypothetical protein. | 0.726 |
EDM26603.1 | EDM25250.1 | LNTAR_02307 | LNTAR_24763 | Probable secreted glycosyl hydrolase. | Probable oxidoreductase; COG0673 Predicted dehydrogenases and related proteins. | 0.654 |
EDM26603.1 | EDM26682.1 | LNTAR_02307 | LNTAR_18585 | Probable secreted glycosyl hydrolase. | Probable lipopolysaccharide biosynthesis protein BplA-putative NADH-dependent oxidoreductase; COG0673 Predicted dehydrogenases and related proteins. | 0.492 |
EDM26603.1 | EDM27538.1 | LNTAR_02307 | LNTAR_05481 | Probable secreted glycosyl hydrolase. | Hypothetical protein; COG0495 Leucyl-tRNA synthetase. | 0.737 |
EDM26603.1 | EDM28403.1 | LNTAR_02307 | LNTAR_10821 | Probable secreted glycosyl hydrolase. | COG0095 Lipoate-protein ligase A. | 0.597 |
EDM26603.1 | EDM28435.1 | LNTAR_02307 | LNTAR_10981 | Probable secreted glycosyl hydrolase. | Hypothetical protein. | 0.683 |
EDM26682.1 | EDM25891.1 | LNTAR_18585 | LNTAR_07609 | Probable lipopolysaccharide biosynthesis protein BplA-putative NADH-dependent oxidoreductase; COG0673 Predicted dehydrogenases and related proteins. | Hypothetical protein; COG2133 Glucose/sorbosone dehydrogenases. | 0.424 |
EDM26682.1 | EDM26603.1 | LNTAR_18585 | LNTAR_02307 | Probable lipopolysaccharide biosynthesis protein BplA-putative NADH-dependent oxidoreductase; COG0673 Predicted dehydrogenases and related proteins. | Probable secreted glycosyl hydrolase. | 0.492 |
EDM26682.1 | EDM27538.1 | LNTAR_18585 | LNTAR_05481 | Probable lipopolysaccharide biosynthesis protein BplA-putative NADH-dependent oxidoreductase; COG0673 Predicted dehydrogenases and related proteins. | Hypothetical protein; COG0495 Leucyl-tRNA synthetase. | 0.718 |
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