STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM28104.1Hypothetical protein. (129 aa)    
Predicted Functional Partners:
EDM28102.1
General secretion pathway protein G; COG2165 Type II secretory pathway, pseudopilin PulG.
       0.773
EDM28103.1
COG4969 Tfp pilus assembly protein, major pilin PilA.
       0.773
EDM28105.1
General secretion pathway protein J; COG4795 Type II secretory pathway, component PulJ.
       0.773
EDM28107.1
Hypothetical protein.
       0.773
EDM28108.1
Hypothetical protein.
       0.773
EDM28109.1
Hypothetical protein.
       0.773
EDM28110.1
Hypothetical protein.
       0.773
EDM28101.1
General secretion pathway protein F; COG1459 Type II secretory pathway, component PulF.
       0.723
EDM28111.1
Secretion protein XqhA; COG1450 Type II secretory pathway, component PulD; Belongs to the bacterial secretin family.
       0.615
EDM28112.1
COG2804 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB.
       0.615
Your Current Organism:
Lentisphaera araneosa
NCBI taxonomy Id: 313628
Other names: L. araneosa HTCC2155, Lentisphaera araneosa HTCC2155, Lentisphaera araneosa str. HTCC2155, Lentisphaera araneosa strain HTCC2155
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.