STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM28105.1General secretion pathway protein J; COG4795 Type II secretory pathway, component PulJ. (221 aa)    
Predicted Functional Partners:
EDM28107.1
Hypothetical protein.
  
 
 0.972
EDM28102.1
General secretion pathway protein G; COG2165 Type II secretory pathway, pseudopilin PulG.
  
  0.858
EDM28101.1
General secretion pathway protein F; COG1459 Type II secretory pathway, component PulF.
  
  
 0.776
EDM28103.1
COG4969 Tfp pilus assembly protein, major pilin PilA.
       0.773
EDM28104.1
Hypothetical protein.
       0.773
EDM28108.1
Hypothetical protein.
       0.773
EDM28109.1
Hypothetical protein.
       0.773
EDM28110.1
Hypothetical protein.
       0.773
EDM28112.1
COG2804 Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB.
     
 0.647
EDM28111.1
Secretion protein XqhA; COG1450 Type II secretory pathway, component PulD; Belongs to the bacterial secretin family.
  
  
 0.643
Your Current Organism:
Lentisphaera araneosa
NCBI taxonomy Id: 313628
Other names: L. araneosa HTCC2155, Lentisphaera araneosa HTCC2155, Lentisphaera araneosa str. HTCC2155, Lentisphaera araneosa strain HTCC2155
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.