STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM28202.1General secretion proteinG; COG2165 Type II secretory pathway, pseudopilin PulG. (196 aa)    
Predicted Functional Partners:
EDM28204.1
Hypothetical protein.
       0.618
EDM27406.1
Hypothetical protein; COG1266 Predicted metal-dependent membrane protease.
  
     0.613
EDM28205.1
Radical SAM domain protein; COG1060 Thiamine biosynthesis enzyme ThiH and related uncharacterized enzymes.
       0.563
EDM27134.1
Hypothetical protein.
  
     0.543
EDM29642.1
Hypothetical protein; COG2165 Type II secretory pathway, pseudopilin PulG.
  
     0.526
EDM27416.1
Hypothetical protein.
  
     0.517
EDM29197.1
Hypothetical protein.
  
     0.517
EDM29340.1
Hypothetical protein; COG2165 Type II secretory pathway, pseudopilin PulG.
  
     0.503
EDM25543.1
Hypothetical protein; COG2165 Type II secretory pathway, pseudopilin PulG.
  
     0.501
EDM27856.1
COG5651 PPE-repeat proteins.
  
     0.497
Your Current Organism:
Lentisphaera araneosa
NCBI taxonomy Id: 313628
Other names: L. araneosa HTCC2155, Lentisphaera araneosa HTCC2155, Lentisphaera araneosa str. HTCC2155, Lentisphaera araneosa strain HTCC2155
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.