STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM28832.1COG3385 FOG: Transposase and inactivated derivatives. (150 aa)    
Predicted Functional Partners:
EDM28833.1
Probable transposase.
      0.801
EDM29208.1
ISPg4, transposase.
  
     0.773
EDM27421.1
Transposase; COG3385 FOG: Transposase and inactivated derivatives.
  
     0.766
EDM29550.1
ISPg4, transposase.
  
     0.747
EDM25442.1
Hypothetical protein.
  
     0.501
EDM28830.1
Hypothetical protein; COG4665 TRAP-type mannitol/chloroaromatic compound transport system, small permease component.
       0.476
EDM28831.1
Hypothetical protein.
       0.476
EDM25441.1
Hypothetical protein.
  
     0.418
EDM28834.1
COG3209 Rhs family protein.
       0.416
Your Current Organism:
Lentisphaera araneosa
NCBI taxonomy Id: 313628
Other names: L. araneosa HTCC2155, Lentisphaera araneosa HTCC2155, Lentisphaera araneosa str. HTCC2155, Lentisphaera araneosa strain HTCC2155
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.