STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM28836.1DppD; COG0444 ABC-type dipeptide/oligopeptide/nickel transport system, ATPase component; Belongs to the ABC transporter superfamily. (337 aa)    
Predicted Functional Partners:
EDM28837.1
COG1173 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 
 0.998
EDM28838.1
COG0601 ABC-type dipeptide/oligopeptide/nickel transport systems, permease components.
 0.993
EDM28839.1
COG4166 ABC-type oligopeptide transport system, periplasmic component.
 
 0.979
EDM27237.1
COG4239 ABC-type uncharacterized transport system, permease component.
  
 0.976
EDM26646.1
Regulatory protein, AsnC/Lrp; COG1116 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component.
 
 
0.975
EDM28835.1
Oligopeptide ABC transporter ATP-binding protein; COG4608 ABC-type oligopeptide transport system, ATPase component; Belongs to the ABC transporter superfamily.
 
 
 
0.926
EDM29025.1
ABC transporter, ATP-binding protein; COG1136 ABC-type antimicrobial peptide transport system, ATPase component.
 
    
0.903
EDM28640.1
Putative multiple sugar transport protein; COG3839 ABC-type sugar transport systems, ATPase components.
 
     
0.900
EDM25936.1
ABC transporter, ATP-binding protein; COG1137 ABC-type (unclassified) transport system, ATPase component.
 
     
0.894
EDM28124.1
COG3839 ABC-type sugar transport systems, ATPase components.
 
    
0.893
Your Current Organism:
Lentisphaera araneosa
NCBI taxonomy Id: 313628
Other names: L. araneosa HTCC2155, Lentisphaera araneosa HTCC2155, Lentisphaera araneosa str. HTCC2155, Lentisphaera araneosa strain HTCC2155
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.