Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EDM27762.1 | EDM28879.1 | LNTAR_00135 | LNTAR_13722 | Putative peroxiredoxin/glutaredoxin family protein; COG0678 Peroxiredoxin. | Possible ribosomal protein S6 modification protein; COG4067 Uncharacterized protein conserved in archaea. | 0.699 |
EDM28879.1 | EDM27762.1 | LNTAR_13722 | LNTAR_00135 | Possible ribosomal protein S6 modification protein; COG4067 Uncharacterized protein conserved in archaea. | Putative peroxiredoxin/glutaredoxin family protein; COG0678 Peroxiredoxin. | 0.699 |
EDM28879.1 | EDM29420.1 | LNTAR_13722 | LNTAR_16758 | Possible ribosomal protein S6 modification protein; COG4067 Uncharacterized protein conserved in archaea. | Hypothetical protein. | 0.418 |
EDM28879.1 | EDM29679.1 | LNTAR_13722 | LNTAR_18053 | Possible ribosomal protein S6 modification protein; COG4067 Uncharacterized protein conserved in archaea. | COG0372 Citrate synthase; Belongs to the citrate synthase family. | 0.406 |
EDM28879.1 | argB | LNTAR_13722 | LNTAR_20488 | Possible ribosomal protein S6 modification protein; COG4067 Uncharacterized protein conserved in archaea. | Acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily. | 0.432 |
EDM28879.1 | secD | LNTAR_13722 | LNTAR_15517 | Possible ribosomal protein S6 modification protein; COG4067 Uncharacterized protein conserved in archaea. | Protein-export membrane protein SECD; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA; Belongs to the SecD/SecF family. SecD subfamily. | 0.423 |
EDM29420.1 | EDM28879.1 | LNTAR_16758 | LNTAR_13722 | Hypothetical protein. | Possible ribosomal protein S6 modification protein; COG4067 Uncharacterized protein conserved in archaea. | 0.418 |
EDM29679.1 | EDM28879.1 | LNTAR_18053 | LNTAR_13722 | COG0372 Citrate synthase; Belongs to the citrate synthase family. | Possible ribosomal protein S6 modification protein; COG4067 Uncharacterized protein conserved in archaea. | 0.406 |
argB | EDM28879.1 | LNTAR_20488 | LNTAR_13722 | Acetylglutamate kinase; Catalyzes the ATP-dependent phosphorylation of N-acetyl-L- glutamate; Belongs to the acetylglutamate kinase family. ArgB subfamily. | Possible ribosomal protein S6 modification protein; COG4067 Uncharacterized protein conserved in archaea. | 0.432 |
secD | EDM28879.1 | LNTAR_15517 | LNTAR_13722 | Protein-export membrane protein SECD; Part of the Sec protein translocase complex. Interacts with the SecYEG preprotein conducting channel. SecDF uses the proton motive force (PMF) to complete protein translocation after the ATP-dependent function of SecA; Belongs to the SecD/SecF family. SecD subfamily. | Possible ribosomal protein S6 modification protein; COG4067 Uncharacterized protein conserved in archaea. | 0.423 |