STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM28909.1Pilus biogenesis protein and ABC-type transporter; COG1277 ABC-type transport system involved in multi-copper enzyme maturation, permease component. (320 aa)    
Predicted Functional Partners:
EDM28210.1
Putative ABC transporter ATP-binding protein; COG1131 ABC-type multidrug transport system, ATPase component.
  
  0.831
EDM24955.1
Putative ABC transporter ATP-binding protein; COG1131 ABC-type multidrug transport system, ATPase component.
  
  0.815
EDM28910.1
Putative transcriptional regulator (LysR family) protein; COG0583 Transcriptional regulator; Belongs to the LysR transcriptional regulatory family.
       0.773
rnhA
Ribonuclease H; Endonuclease that specifically degrades the RNA of RNA-DNA hybrids; Belongs to the RNase H family.
       0.773
EDM28912.1
COG0793 Periplasmic protease; Belongs to the peptidase S41A family.
       0.773
EDM28913.1
Hypothetical protein.
       0.773
EDM28908.1
Hypothetical protein.
       0.762
EDM29198.1
Hypothetical protein.
  
     0.701
EDM26859.1
Hypothetical protein.
  
     0.657
EDM26019.1
Hypothetical protein.
  
     0.655
Your Current Organism:
Lentisphaera araneosa
NCBI taxonomy Id: 313628
Other names: L. araneosa HTCC2155, Lentisphaera araneosa HTCC2155, Lentisphaera araneosa str. HTCC2155, Lentisphaera araneosa strain HTCC2155
Server load: low (24%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.