STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM28963.1COG0848 Biopolymer transport protein. (130 aa)    
Predicted Functional Partners:
EDM28964.1
COG0811 Biopolymer transport proteins.
 
   0.956
EDM28960.1
COG0515 Serine/threonine protein kinase.
       0.773
hflX
Hypothetical protein; GTPase that associates with the 50S ribosomal subunit and may have a role during protein synthesis or ribosome biogenesis. Belongs to the TRAFAC class OBG-HflX-like GTPase superfamily. HflX GTPase family.
       0.773
EDM28962.1
Hypothetical protein.
       0.773
EDM26507.1
Putative TonB2 protein; COG0810 Periplasmic protein TonB, links inner and outer membranes.
  
 
 0.697
EDM26510.1
Transport protein TolQ-like protein; COG1196 Chromosome segregation ATPases.
  
   0.669
EDM26509.1
MotA/TolQ/ExbB proton channel; COG0811 Biopolymer transport proteins.
  
   0.630
EDM27162.1
COG2885 Outer membrane protein and related peptidoglycan-associated (lipo)proteins.
  
 
   0.629
EDM25824.1
COG0811 Biopolymer transport proteins.
  
   0.617
EDM26066.1
WD40-like Beta Propeller; COG0823 Periplasmic component of the Tol biopolymer transport system.
  
    0.602
Your Current Organism:
Lentisphaera araneosa
NCBI taxonomy Id: 313628
Other names: L. araneosa HTCC2155, Lentisphaera araneosa HTCC2155, Lentisphaera araneosa str. HTCC2155, Lentisphaera araneosa strain HTCC2155
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.