STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM29017.1COG3855 Uncharacterized protein conserved in bacteria. (94 aa)    
Predicted Functional Partners:
EDM24876.1
Hypothetical protein; COG0782 Transcription elongation factor.
  
     0.630
EDM25156.1
Hypothetical protein; COG1451 Predicted metal-dependent hydrolase.
  
     0.542
EDM27945.1
COG4807 Uncharacterized protein conserved in bacteria.
 
     0.512
EDM26517.1
Hypothetical protein.
  
     0.482
EDM28971.1
COG4807 Uncharacterized protein conserved in bacteria.
 
     0.466
EDM29018.1
Hypothetical protein; COG0840 Methyl-accepting chemotaxis protein.
       0.433
EDM28225.1
Hypothetical protein.
  
     0.427
EDM25127.1
Probable signal peptide protein.
  
     0.406
Your Current Organism:
Lentisphaera araneosa
NCBI taxonomy Id: 313628
Other names: L. araneosa HTCC2155, Lentisphaera araneosa HTCC2155, Lentisphaera araneosa str. HTCC2155, Lentisphaera araneosa strain HTCC2155
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.