STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM29041.1Capsular polysaccharide biosynthsis protein; COG0438 Glycosyltransferase. (399 aa)    
Predicted Functional Partners:
EDM29043.1
Putative glycosyltransferase; COG3774 Mannosyltransferase OCH1 and related enzymes.
    0.816
EDM29042.1
Hypothetical protein; COG1835 Predicted acyltransferases.
       0.773
EDM29040.1
Glycosyl transferase, group 2 family protein; COG0463 Glycosyltransferases involved in cell wall biogenesis.
 
 
  0.771
EDM29044.1
YveO; COG0463 Glycosyltransferases involved in cell wall biogenesis.
 
 
  0.713
EDM25182.1
COG0438 Glycosyltransferase.
  
     0.658
EDM29045.1
Capsular polysaccharide biosynthesis protein; COG1368 Phosphoglycerol transferase and related proteins, alkaline phosphatase superfamily.
  
    0.623
EDM29033.1
alpha-D-QuiNAc alpha-1,3-galactosyltransferase; COG0438 Glycosyltransferase.
 
     0.609
EDM25347.1
COG0438 Glycosyltransferase.
  
     0.566
EDM25042.1
COG0438 Glycosyltransferase.
  
     0.546
EDM29034.1
Probable flippase; COG2244 Membrane protein involved in the export of O-antigen and teichoic acid.
 
    0.505
Your Current Organism:
Lentisphaera araneosa
NCBI taxonomy Id: 313628
Other names: L. araneosa HTCC2155, Lentisphaera araneosa HTCC2155, Lentisphaera araneosa str. HTCC2155, Lentisphaera araneosa strain HTCC2155
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