Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
EDM27081.1 | EDM27082.1 | LNTAR_15467 | LNTAR_15472 | COG0422 Thiamine biosynthesis protein ThiC. | Hypothetical protein; COG0249 Mismatch repair ATPase (MutS family). | 0.483 |
EDM27082.1 | EDM27081.1 | LNTAR_15472 | LNTAR_15467 | Hypothetical protein; COG0249 Mismatch repair ATPase (MutS family). | COG0422 Thiamine biosynthesis protein ThiC. | 0.483 |
EDM27082.1 | EDM27083.1 | LNTAR_15472 | LNTAR_15477 | Hypothetical protein; COG0249 Mismatch repair ATPase (MutS family). | ABC transporter (ATP-binding protein)-putative sodium extrusion ABC transporter; COG4555 ABC-type Na+ transport system, ATPase component. | 0.467 |
EDM27082.1 | EDM27084.1 | LNTAR_15472 | LNTAR_15482 | Hypothetical protein; COG0249 Mismatch repair ATPase (MutS family). | Hypothetical zinc metalloprotease; COG0750 Predicted membrane-associated Zn-dependent proteases 1. | 0.467 |
EDM27083.1 | EDM27082.1 | LNTAR_15477 | LNTAR_15472 | ABC transporter (ATP-binding protein)-putative sodium extrusion ABC transporter; COG4555 ABC-type Na+ transport system, ATPase component. | Hypothetical protein; COG0249 Mismatch repair ATPase (MutS family). | 0.467 |
EDM27083.1 | EDM27084.1 | LNTAR_15477 | LNTAR_15482 | ABC transporter (ATP-binding protein)-putative sodium extrusion ABC transporter; COG4555 ABC-type Na+ transport system, ATPase component. | Hypothetical zinc metalloprotease; COG0750 Predicted membrane-associated Zn-dependent proteases 1. | 0.774 |
EDM27084.1 | EDM27082.1 | LNTAR_15482 | LNTAR_15472 | Hypothetical zinc metalloprotease; COG0750 Predicted membrane-associated Zn-dependent proteases 1. | Hypothetical protein; COG0249 Mismatch repair ATPase (MutS family). | 0.467 |
EDM27084.1 | EDM27083.1 | LNTAR_15482 | LNTAR_15477 | Hypothetical zinc metalloprotease; COG0750 Predicted membrane-associated Zn-dependent proteases 1. | ABC transporter (ATP-binding protein)-putative sodium extrusion ABC transporter; COG4555 ABC-type Na+ transport system, ATPase component. | 0.774 |