STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM29488.1COG4102 Uncharacterized protein conserved in bacteria. (465 aa)    
Predicted Functional Partners:
EDM29487.1
Probable chromosome segregation protein.
 
     0.941
EDM26580.1
COG0539 Ribosomal protein S1.
  
     0.775
EDM24989.1
Hypothetical protein.
  
     0.775
EDM28608.1
Hypothetical protein.
  
     0.775
EDM28475.1
Hypothetical protein.
  
     0.775
EDM25698.1
Hypothetical protein.
  
     0.775
EDM28853.1
Hypothetical protein.
  
     0.775
EDM29443.1
Probable chromosome segregation protein.
  
     0.775
EDM29481.1
Hypothetical protein.
  
     0.775
EDM29482.1
Hypothetical protein.
  
     0.775
Your Current Organism:
Lentisphaera araneosa
NCBI taxonomy Id: 313628
Other names: L. araneosa HTCC2155, Lentisphaera araneosa HTCC2155, Lentisphaera araneosa str. HTCC2155, Lentisphaera araneosa strain HTCC2155
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