STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM29512.1Hypothetical protein. (181 aa)    
Predicted Functional Partners:
EDM29511.1
DSBA oxidoreductase; COG3917 2-hydroxychromene-2-carboxylate isomerase.
       0.773
EDM29513.1
PHP-like protein; COG0613 Predicted metal-dependent phosphoesterases (PHP family).
       0.773
EDM29514.1
COG0564 Pseudouridylate synthases, 23S RNA-specific.
       0.773
EDM29515.1
Hypothetical protein; COG0382 4-hydroxybenzoate polyprenyltransferase and related prenyltransferases.
       0.773
aroB
COG0337 3-dehydroquinate synthetase.
       0.425
EDM29517.1
Hypothetical protein; COG1082 Sugar phosphate isomerases/epimerases.
       0.425
EDM29510.1
COG3206 Uncharacterized protein involved in exopolysaccharide biosynthesis.
       0.415
uppP
Undecaprenyl pyrophosphate phosphatase; COG0457 FOG: TPR repeat.
       0.401
uppP-2
Putative undecaprenol kinase; Catalyzes the dephosphorylation of undecaprenyl diphosphate (UPP). Confers resistance to bacitracin; Belongs to the UppP family.
       0.401
Your Current Organism:
Lentisphaera araneosa
NCBI taxonomy Id: 313628
Other names: L. araneosa HTCC2155, Lentisphaera araneosa HTCC2155, Lentisphaera araneosa str. HTCC2155, Lentisphaera araneosa strain HTCC2155
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.