STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM29542.1COG3525 N-acetyl-beta-hexosaminidase. (688 aa)    
Predicted Functional Partners:
EDM26391.1
COG4409 Neuraminidase (sialidase).
 
 
 0.611
EDM24968.1
Probable N-acyl-D-glutamate deacylase protein; COG3653 N-acyl-D-aspartate/D-glutamate deacylase.
   
  0.573
EDM28163.1
Putative alpha-1,2-mannosidase.
  
 0.563
EDM27925.1
COG3669 Alpha-L-fucosidase.
   
 0.545
EDM27919.1
COG3669 Alpha-L-fucosidase.
   
 0.541
EDM27396.1
COG2273 Beta-glucanase/Beta-glucan synthetase.
  
  
  0.536
EDM26860.1
COG2273 Beta-glucanase/Beta-glucan synthetase.
  
  
  0.530
EDM25162.1
Chitinase, class I; COG1388 FOG: LysM repeat.
     
 0.524
EDM27759.1
Hypothetical protein; Nuclease required for the repair of DNA interstrand cross- links (ICL). Acts as a 5'-3' exonuclease that anchors at a cut end of DNA and cleaves DNA successively at every third nucleotide, allowing to excise an ICL from one strand through flanking incisions. Belongs to the FAN1 family.
    
 0.522
EDM27110.1
COG2273 Beta-glucanase/Beta-glucan synthetase.
  
  
  0.522
Your Current Organism:
Lentisphaera araneosa
NCBI taxonomy Id: 313628
Other names: L. araneosa HTCC2155, Lentisphaera araneosa HTCC2155, Lentisphaera araneosa str. HTCC2155, Lentisphaera araneosa strain HTCC2155
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.