STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM29549.1COG3385 FOG: Transposase and inactivated derivatives. (250 aa)    
Predicted Functional Partners:
EDM29550.1
ISPg4, transposase.
     0.953
EDM27421.1
Transposase; COG3385 FOG: Transposase and inactivated derivatives.
  
     0.770
EDM25442.1
Hypothetical protein.
  
     0.513
EDM29551.1
COG0515 Serine/threonine protein kinase.
       0.503
EDM29547.1
Hypothetical protein.
       0.457
EDM29548.1
COG3119 Arylsulfatase A and related enzymes.
       0.457
EDM25383.1
Hypothetical protein.
  
     0.400
Your Current Organism:
Lentisphaera araneosa
NCBI taxonomy Id: 313628
Other names: L. araneosa HTCC2155, Lentisphaera araneosa HTCC2155, Lentisphaera araneosa str. HTCC2155, Lentisphaera araneosa strain HTCC2155
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.