STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM29569.1Hypothetical protein. (378 aa)    
Predicted Functional Partners:
EDM25913.1
Probable RNA polymerase sigma-70 factor, ECF subfamily protein; COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog; Belongs to the sigma-70 factor family. ECF subfamily.
  
     0.712
EDM28607.1
Hypothetical protein.
  
     0.699
EDM26788.1
Hypothetical protein.
  
     0.698
EDM27927.1
Hypothetical protein.
  
     0.694
EDM26805.1
Hypothetical protein.
  
     0.693
EDM25626.1
Hypothetical protein.
  
     0.691
EDM29450.1
Hypothetical protein.
  
     0.688
EDM29559.1
Hypothetical protein.
  
     0.663
EDM28625.1
Hypothetical protein.
  
     0.657
EDM29277.1
Hypothetical protein.
  
     0.645
Your Current Organism:
Lentisphaera araneosa
NCBI taxonomy Id: 313628
Other names: L. araneosa HTCC2155, Lentisphaera araneosa HTCC2155, Lentisphaera araneosa str. HTCC2155, Lentisphaera araneosa strain HTCC2155
Server load: low (22%) [HD]