STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM26391.1COG4409 Neuraminidase (sialidase). (388 aa)    
Predicted Functional Partners:
EDM26390.1
Putative N-acetylneuraminate lyase (sialic acid lyase); COG0329 Dihydrodipicolinate synthase/N-acetylneuraminate lyase.
 
   
 0.898
EDM27927.1
Hypothetical protein.
 
  
  0.774
EDM29277.1
Hypothetical protein.
 
  
  0.738
EDM26392.1
Lipolytic enzyme, G-D-S-L; COG2755 Lysophospholipase L1 and related esterases.
 
  
  0.734
EDM26393.1
Putative alpha-1,2-mannosidase.
 
     0.716
EDM26394.1
Hypothetical protein.
 
  
  0.692
EDM26389.1
COG4409 Neuraminidase (sialidase).
      0.677
EDM29254.1
Possible glycosyl hydrolase; COG3664 Beta-xylosidase.
  
  
  0.670
EDM29191.1
TonB-like protein; COG2755 Lysophospholipase L1 and related esterases.
 
  
  0.642
EDM26222.1
TonB-like protein; COG2755 Lysophospholipase L1 and related esterases.
 
  
  0.640
Your Current Organism:
Lentisphaera araneosa
NCBI taxonomy Id: 313628
Other names: L. araneosa HTCC2155, Lentisphaera araneosa HTCC2155, Lentisphaera araneosa str. HTCC2155, Lentisphaera araneosa strain HTCC2155
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.