STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM27552.1Hypothetical protein. (1044 aa)    
Predicted Functional Partners:
EDM27551.1
Hypothetical protein; COG3119 Arylsulfatase A and related enzymes.
 
     0.946
EDM27233.1
Cytochrome c, class I; COG2863 Cytochrome c553.
  
 0.863
EDM25696.1
Twin-arginine translocation pathway signal.
  
  0.833
EDM26414.1
Twin-arginine translocation pathway signal.
  
  0.821
EDM24773.1
Molybdopterin oxidoreductase, iron-sulfur binding subunit; COG0243 Anaerobic dehydrogenases, typically selenocysteine-containing.
  
  0.815
EDM26581.1
Hypothetical protein; COG0464 ATPases of the AAA+ class.
  
     0.775
EDM24990.1
Hypothetical protein; COG3083 Predicted hydrolase of alkaline phosphatase superfamily.
  
     0.775
EDM28609.1
Hypothetical protein.
  
     0.775
EDM28616.1
Hypothetical protein; COG3119 Arylsulfatase A and related enzymes.
  
     0.775
EDM28693.1
COG4102 Uncharacterized protein conserved in bacteria.
  
     0.775
Your Current Organism:
Lentisphaera araneosa
NCBI taxonomy Id: 313628
Other names: L. araneosa HTCC2155, Lentisphaera araneosa HTCC2155, Lentisphaera araneosa str. HTCC2155, Lentisphaera araneosa strain HTCC2155
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