STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM27555.1Probable trehalosemaltose utilization protein, function; COG0673 Predicted dehydrogenases and related proteins. (343 aa)    
Predicted Functional Partners:
EDM25808.1
Lipopolysaccharide biosynthesis protein; COG0673 Predicted dehydrogenases and related proteins.
  
     0.773
EDM28761.1
Oxidoreductase, putative; COG0673 Predicted dehydrogenases and related proteins.
  
     0.767
EDM28728.1
Hypothetical protein; COG0673 Predicted dehydrogenases and related proteins.
  
     0.685
EDM26210.1
Glycerol-3-phosphate cytidyltransferase; COG0615 Cytidylyltransferase.
  
     0.664
EDM26406.1
Oxidoreductase, streptomycin biosynthesis protein (strI-related protein); COG0673 Predicted dehydrogenases and related proteins.
  
     0.650
EDM26682.1
Probable lipopolysaccharide biosynthesis protein BplA-putative NADH-dependent oxidoreductase; COG0673 Predicted dehydrogenases and related proteins.
  
     0.639
EDM28089.1
Putative NADH-dependent oxidoreductase-possiblyglucose-fructose dependent oxidoreductase; COG0673 Predicted dehydrogenases and related proteins.
  
     0.631
EDM27539.1
Probable Myo-inositol 2-dehydrogenase; COG0673 Predicted dehydrogenases and related proteins.
  
     0.594
EDM27554.1
Hypothetical protein.
       0.568
EDM27556.1
tRNA modification GTPase.
       0.549
Your Current Organism:
Lentisphaera araneosa
NCBI taxonomy Id: 313628
Other names: L. araneosa HTCC2155, Lentisphaera araneosa HTCC2155, Lentisphaera araneosa str. HTCC2155, Lentisphaera araneosa strain HTCC2155
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.