STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM27633.1COG3547 Transposase and inactivated derivatives. (364 aa)    
Predicted Functional Partners:
EDM24977.1
COG3547 Transposase and inactivated derivatives.
  
     0.639
EDM26634.1
COG3547 Transposase and inactivated derivatives.
  
     0.627
EDM29441.1
COG3547 Transposase and inactivated derivatives.
  
     0.627
EDM25399.1
COG3547 Transposase and inactivated derivatives.
  
     0.626
EDM29360.1
COG3547 Transposase and inactivated derivatives.
  
     0.626
EDM25497.1
COG3547 Transposase and inactivated derivatives.
  
     0.606
EDM24706.1
COG3547 Transposase and inactivated derivatives.
  
     0.561
EDM28018.1
COG3547 Transposase and inactivated derivatives.
  
     0.557
EDM27634.1
COG3677 Transposase and inactivated derivatives.
       0.542
EDM27803.1
Glycosyl transferase, group 1:PHP-like protein; COG0176 Transaldolase.
  
     0.519
Your Current Organism:
Lentisphaera araneosa
NCBI taxonomy Id: 313628
Other names: L. araneosa HTCC2155, Lentisphaera araneosa HTCC2155, Lentisphaera araneosa str. HTCC2155, Lentisphaera araneosa strain HTCC2155
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.