STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM27659.1HlyD family secretion protein; COG0845 Membrane-fusion protein. (502 aa)    
Predicted Functional Partners:
EDM27658.1
Toxin secretion ATP-binding protein; COG2274 ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain.
 0.985
EDM27660.1
Type I secretion outer membrane protein, TolC; COG1538 Outer membrane protein.
 
  0.976
EDM24652.1
ABC transporter related protein; COG2274 ABC-type bacteriocin/lantibiotic exporters, contain an N-terminal double-glycine peptidase domain.
 0.876
EDM25350.1
Transmembrane ATP-binding ABC transporter protein; COG1136 ABC-type antimicrobial peptide transport system, ATPase component; Belongs to the ABC transporter superfamily. Macrolide exporter (TC 3.A.1.122) family.
  
 
 0.789
EDM27661.1
Hypothetical protein.
       0.737
EDM27593.1
COG1538 Outer membrane protein.
  
  0.661
EDM27501.1
COG1538 Outer membrane protein.
  
  0.645
EDM27797.1
COG1538 Outer membrane protein.
   
  0.580
EDM25849.1
COG1538 Outer membrane protein.
   
  0.580
EDM25113.1
COG1538 Outer membrane protein.
   
  0.580
Your Current Organism:
Lentisphaera araneosa
NCBI taxonomy Id: 313628
Other names: L. araneosa HTCC2155, Lentisphaera araneosa HTCC2155, Lentisphaera araneosa str. HTCC2155, Lentisphaera araneosa strain HTCC2155
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.