STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM27680.1Phosphocarrier protein HPr; COG1925 Phosphotransferase system, HPr-related proteins. (90 aa)    
Predicted Functional Partners:
EDM27146.1
COG3605 Signal transduction protein containing GAF and PtsI domains; Belongs to the PEP-utilizing enzyme family.
 
 0.970
EDM29080.1
COG1762 Phosphotransferase system mannitol/fructose-specific IIA domain (Ntr-type).
 
 
 0.960
EDM27202.1
Probable fructose specific permease-possibly phosphotransferase system component; COG0475 Kef-type K+ transport systems, membrane components.
 
 
  0.692
rpsG
30S ribosomal protein S7; One of the primary rRNA binding proteins, it binds directly to 16S rRNA where it nucleates assembly of the head domain of the 30S subunit. Is located at the subunit interface close to the decoding center, probably blocks exit of the E-site tRNA; Belongs to the universal ribosomal protein uS7 family.
   
    0.601
rex
Redox-sensing transcriptional repressor Rex; Modulates transcription in response to changes in cellular NADH/NAD(+) redox state.
       0.588
EDM27682.1
Hypothetical protein; COG1344 Flagellin and related hook-associated proteins.
       0.588
EDM27283.1
Hypothetical protein; COG1609 Transcriptional regulators.
   
 
 0.539
EDM26412.1
DNA-binding transcriptional repressor of ribose metabolism; COG1609 Transcriptional regulators.
  
 
   0.491
EDM26604.1
Xylose operon regulatory protein; COG1609 Transcriptional regulators.
    
 
 0.451
EDM26431.1
Xylose operon regulatory protein; COG1609 Transcriptional regulators.
    
 
 0.451
Your Current Organism:
Lentisphaera araneosa
NCBI taxonomy Id: 313628
Other names: L. araneosa HTCC2155, Lentisphaera araneosa HTCC2155, Lentisphaera araneosa str. HTCC2155, Lentisphaera araneosa strain HTCC2155
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.