STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM27709.1Hypothetical protein. (525 aa)    
Predicted Functional Partners:
EDM27711.1
Probable large, multifunctional secreted protein; COG2857 Cytochrome c1.
 
     0.831
EDM27710.1
Probable extracytoplasmic function alternative sigma factor; COG1595 DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog; Belongs to the sigma-70 factor family. ECF subfamily.
 
     0.813
EDM26968.1
Hypothetical protein.
  
     0.726
EDM26977.1
Hypothetical protein.
  
     0.723
EDM27074.1
Hypothetical protein.
  
     0.720
EDM27043.1
Hypothetical protein.
  
     0.716
EDM26987.1
Hypothetical protein.
  
     0.714
EDM27052.1
Hypothetical protein.
  
     0.714
EDM27053.1
Hypothetical protein.
  
     0.707
EDM26978.1
Hypothetical protein; COG4770 Acetyl/propionyl-CoA carboxylase, alpha subunit.
  
     0.693
Your Current Organism:
Lentisphaera araneosa
NCBI taxonomy Id: 313628
Other names: L. araneosa HTCC2155, Lentisphaera araneosa HTCC2155, Lentisphaera araneosa str. HTCC2155, Lentisphaera araneosa strain HTCC2155
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.