STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM27344.1Aldose 1-epimerase precursor; Converts alpha-aldose to the beta-anomer. (390 aa)    
Predicted Functional Partners:
EDM25018.1
COG1087 UDP-glucose 4-epimerase; Belongs to the NAD(P)-dependent epimerase/dehydratase family.
 
 
 0.935
EDM25017.1
COG0153 Galactokinase; Belongs to the GHMP kinase family. GalK subfamily.
 0.931
EDM27343.1
Hypothetical protein.
       0.757
EDM28593.1
Sugar kinase; COG1940 Transcriptional regulator/sugar kinase.
    
 0.697
EDM29254.1
Possible glycosyl hydrolase; COG3664 Beta-xylosidase.
  
 
  0.612
EDM27342.1
Hypothetical protein; COG3385 FOG: Transposase and inactivated derivatives.
       0.462
EDM27345.1
Hypothetical protein.
       0.440
EDM29465.1
COG3250 Beta-galactosidase/beta-glucuronidase; Belongs to the glycosyl hydrolase 2 family.
 
 
 
  0.410
EDM27883.1
COG0021 Transketolase; Belongs to the transketolase family.
  
 
 0.401
Your Current Organism:
Lentisphaera araneosa
NCBI taxonomy Id: 313628
Other names: L. araneosa HTCC2155, Lentisphaera araneosa HTCC2155, Lentisphaera araneosa str. HTCC2155, Lentisphaera araneosa strain HTCC2155
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.