STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM24856.1Hypothetical protein; COG2133 Glucose/sorbosone dehydrogenases. (1091 aa)    
Predicted Functional Partners:
EDM26597.1
COG0087 Ribosomal protein L3.
  
  
  0.850
EDM27330.1
Hypothetical protein; COG2133 Glucose/sorbosone dehydrogenases.
  
  
  0.840
EDM27706.1
Hypothetical protein; COG2382 Enterochelin esterase and related enzymes.
  
  
  0.838
EDM25437.1
Hypothetical protein; COG2133 Glucose/sorbosone dehydrogenases.
  
  
  0.830
EDM27711.1
Probable large, multifunctional secreted protein; COG2857 Cytochrome c1.
  
  
  0.785
EDM27353.1
Probable large, multifunctional secreted protein; COG2857 Cytochrome c1.
  
  
  0.784
EDM28811.1
Hypothetical protein.
  
     0.772
EDM29143.1
Hypothetical protein.
  
     0.771
EDM27867.1
Probable large, multifunctional secreted protein.
  
     0.761
EDM25381.1
Probable large, multifunctional secreted protein; COG2133 Glucose/sorbosone dehydrogenases.
  
     0.753
Your Current Organism:
Lentisphaera araneosa
NCBI taxonomy Id: 313628
Other names: L. araneosa HTCC2155, Lentisphaera araneosa HTCC2155, Lentisphaera araneosa str. HTCC2155, Lentisphaera araneosa strain HTCC2155
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.