STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM29150.1Transcriptional regulator, AraC family protein; COG2207 AraC-type DNA-binding domain-containing proteins. (250 aa)    
Predicted Functional Partners:
EDM25049.1
Two-component hybrid sensor and regulator; COG0784 FOG: CheY-like receiver.
  
 0.912
EDM28312.1
Hypothetical protein; COG2207 AraC-type DNA-binding domain-containing proteins.
 
 
  0.891
EDM26434.1
Sensor histidine kinase/response regulator; COG0642 Signal transduction histidine kinase.
  
 0.865
radC
DNA repair protein RadC; COG2198 FOG: HPt domain.
  
 0.865
EDM27166.1
ATP-binding region, ATPase-like protein; COG0642 Signal transduction histidine kinase.
  
 0.864
EDM27772.1
SENSORY TRANSDUCTION HISTIDINE KINASE; COG0834 ABC-type amino acid transport/signal transduction systems, periplasmic component/domain.
   
 0.860
EDM25123.1
Periplasmic Sensor Hybrid Histidine Kinase; COG0642 Signal transduction histidine kinase.
  
 0.860
EDM25580.1
Transcriptional regulator; COG0642 Signal transduction histidine kinase.
  
 0.860
EDM28995.1
COG0784 FOG: CheY-like receiver.
  
 0.856
EDM26367.1
COG0642 Signal transduction histidine kinase.
  
 0.819
Your Current Organism:
Lentisphaera araneosa
NCBI taxonomy Id: 313628
Other names: L. araneosa HTCC2155, Lentisphaera araneosa HTCC2155, Lentisphaera araneosa str. HTCC2155, Lentisphaera araneosa strain HTCC2155
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.