STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM29181.1COG3661 Alpha-glucuronidase; Belongs to the glycosyl hydrolase 67 family. (1607 aa)    
Predicted Functional Partners:
EDM26432.1
Alpha-L-arabinofuranosidase; COG3507 Beta-xylosidase; Belongs to the glycosyl hydrolase 43 family.
  
     0.773
EDM26428.1
Endo-1,4-beta-xylanase; COG3693 Beta-1,4-xylanase.
  
     0.766
EDM29603.1
Endo-1,4-beta-xylanase; COG3693 Beta-1,4-xylanase.
  
     0.759
EDM25811.1
Hypothetical protein; COG2755 Lysophospholipase L1 and related esterases.
  
     0.670
EDM26022.1
Mannan endo-1,4-beta-mannosidase precursor; Belongs to the glycosyl hydrolase 26 family.
  
     0.587
EDM28763.1
Arabinofuranosidase; COG3507 Beta-xylosidase; Belongs to the glycosyl hydrolase 43 family.
 
     0.572
EDM28712.1
Cellulase precursor.
  
     0.562
EDM28714.1
3-hydroxyacyl-CoA dehydrogenase; COG2730 Endoglucanase; Belongs to the glycosyl hydrolase 5 (cellulase A) family.
  
     0.529
EDM27334.1
COG3507 Beta-xylosidase; Belongs to the glycosyl hydrolase 43 family.
  
     0.521
EDM29182.1
COG0381 UDP-N-acetylglucosamine 2-epimerase.
       0.494
Your Current Organism:
Lentisphaera araneosa
NCBI taxonomy Id: 313628
Other names: L. araneosa HTCC2155, Lentisphaera araneosa HTCC2155, Lentisphaera araneosa str. HTCC2155, Lentisphaera araneosa strain HTCC2155
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.