STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM29182.1COG0381 UDP-N-acetylglucosamine 2-epimerase. (384 aa)    
Predicted Functional Partners:
EDM29183.1
Hypothetical protein.
       0.773
EDM29047.1
COG0677 UDP-N-acetyl-D-mannosaminuronate dehydrogenase; Belongs to the UDP-glucose/GDP-mannose dehydrogenase family.
 
 
 0.717
EDM29510.1
COG3206 Uncharacterized protein involved in exopolysaccharide biosynthesis.
    
 0.654
EDM25489.1
Protein-tyrosine kinase; COG3206 Uncharacterized protein involved in exopolysaccharide biosynthesis.
    
 0.654
EDM29184.1
COG1215 Glycosyltransferases, probably involved in cell wall biogenesis.
    
  0.649
EDM29185.1
Hypothetical protein.
       0.594
EDM29186.1
Hypothetical protein.
       0.594
EDM29181.1
COG3661 Alpha-glucuronidase; Belongs to the glycosyl hydrolase 67 family.
       0.494
EDM29187.1
Hypothetical protein.
       0.494
EDM27625.1
COG1088 dTDP-D-glucose 4,6-dehydratase; Belongs to the NAD(P)-dependent epimerase/dehydratase family. dTDP-glucose dehydratase subfamily.
  
 
 0.465
Your Current Organism:
Lentisphaera araneosa
NCBI taxonomy Id: 313628
Other names: L. araneosa HTCC2155, Lentisphaera araneosa HTCC2155, Lentisphaera araneosa str. HTCC2155, Lentisphaera araneosa strain HTCC2155
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.