STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM29207.1Probable large, multifunctional secreted protein; COG2133 Glucose/sorbosone dehydrogenases. (506 aa)    
Predicted Functional Partners:
EDM29205.1
Putative large, multifunctional secreted protein.
     0.933
EDM25403.1
Hypothetical protein; COG2133 Glucose/sorbosone dehydrogenases.
  
  
  0.799
EDM26422.1
Probable cytochrome c precursor; COG0542 ATPases with chaperone activity, ATP-binding subunit.
  
  
  0.797
EDM28135.1
Hypothetical protein; COG2133 Glucose/sorbosone dehydrogenases.
  
  
  0.796
EDM26417.1
Hypothetical protein; COG2010 Cytochrome c, mono- and diheme variants.
  
  
  0.792
EDM26542.1
Hypothetical protein; COG2133 Glucose/sorbosone dehydrogenases.
  
  
  0.786
EDM29206.1
Hypothetical protein; COG4654 Cytochrome c551/c552.
       0.773
EDM28524.1
Hypothetical protein; COG2010 Cytochrome c, mono- and diheme variants.
  
     0.770
EDM28133.1
Hypothetical protein; COG2010 Cytochrome c, mono- and diheme variants.
  
     0.769
EDM28081.1
Hypothetical protein; COG2133 Glucose/sorbosone dehydrogenases.
  
     0.768
Your Current Organism:
Lentisphaera araneosa
NCBI taxonomy Id: 313628
Other names: L. araneosa HTCC2155, Lentisphaera araneosa HTCC2155, Lentisphaera araneosa str. HTCC2155, Lentisphaera araneosa strain HTCC2155
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.