STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM29366.1Lipopolysaccharide heptosyltransferase II; COG0859 ADP-heptose:LPS heptosyltransferase. (351 aa)    
Predicted Functional Partners:
EDM27870.1
COG2870 ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase.
 
  
 0.844
EDM26493.1
RfaE bifunctional protein, domains I & II; COG2870 ADP-heptose synthase, bifunctional sugar kinase/adenylyltransferase.
 
  
 0.844
gmhA
Phosphoheptose isomerase; Catalyzes the isomerization of sedoheptulose 7-phosphate in D-glycero-D-manno-heptose 7-phosphate; Belongs to the SIS family. GmhA subfamily.
 
  
 0.832
EDM28220.1
Putative 3-deoxy-manno-octulosonate; Involved in lipopolysaccharide (LPS) biosynthesis. Catalyzes the transfer of 3-deoxy-D-manno-octulosonate (Kdo) residue(s) from CMP- Kdo to lipid IV(A), the tetraacyldisaccharide-1,4'-bisphosphate precursor of lipid A; Belongs to the glycosyltransferase group 1 family.
  
 0.809
EDM27140.1
D,D-heptose 1,7-bisphosphate phosphatase; COG0241 Histidinol phosphatase and related phosphatases.
 
  
 0.804
EDM27573.1
ADP-heptose--LPS heptosyltransferase II, putative; COG0859 ADP-heptose:LPS heptosyltransferase.
  
     0.774
EDM24934.1
3-Deoxy-D-manno-octulosonic-acid transferase; COG2121 Uncharacterized protein conserved in bacteria.
 
  
 0.705
EDM24754.1
COG1145 Ferredoxin.
  
   0.699
EDM28895.1
ADP-L-glycero-D-manno-heptose-6-epimerase; COG0451 Nucleoside-diphosphate-sugar epimerases.
  
    0.670
EDM28411.1
Hypothetical protein; COG1560 Lauroyl/myristoyl acyltransferase.
 
  
 0.617
Your Current Organism:
Lentisphaera araneosa
NCBI taxonomy Id: 313628
Other names: L. araneosa HTCC2155, Lentisphaera araneosa HTCC2155, Lentisphaera araneosa str. HTCC2155, Lentisphaera araneosa strain HTCC2155
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