STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM25642.1N-acetylgalactosamine 6-sulfate sulfatase GALNS; COG3119 Arylsulfatase A and related enzymes. (443 aa)    
Predicted Functional Partners:
EDM29236.1
Hypothetical protein; COG3458 Acetyl esterase (deacetylase).
  
     0.750
EDM28068.1
Hypothetical protein; COG0823 Periplasmic component of the Tol biopolymer transport system.
  
     0.742
EDM29213.1
Putative alpha-galactosidase SCF85.02; COG3345 Alpha-galactosidase.
  
     0.736
EDM29247.1
COG4813 Trehalose utilization protein.
  
     0.722
EDM25376.1
Hypothetical protein.
  
     0.714
EDM29246.1
Hypothetical protein; COG0412 Dienelactone hydrolase and related enzymes.
  
     0.696
EDM26202.1
Hypothetical protein.
  
     0.655
EDM25643.1
Hypothetical protein; COG3568 Metal-dependent hydrolase.
       0.642
EDM29238.1
Hypothetical protein; COG1626 Neutral trehalase.
  
     0.612
EDM25644.1
Ser/Thr protein phosphatase family protein; COG1409 Predicted phosphohydrolases.
       0.609
Your Current Organism:
Lentisphaera araneosa
NCBI taxonomy Id: 313628
Other names: L. araneosa HTCC2155, Lentisphaera araneosa HTCC2155, Lentisphaera araneosa str. HTCC2155, Lentisphaera araneosa strain HTCC2155
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.