STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
EDM25658.1Transcriptional regulator, AraC family protein; COG2207 AraC-type DNA-binding domain-containing proteins. (206 aa)    
Predicted Functional Partners:
EDM28312.1
Hypothetical protein; COG2207 AraC-type DNA-binding domain-containing proteins.
  
  
  0.792
EDM24988.1
Transcriptional regulator, AraC family protein; COG2207 AraC-type DNA-binding domain-containing proteins.
  
   0.786
EDM28594.1
Transcriptional regulator, AraC family protein; COG2207 AraC-type DNA-binding domain-containing proteins.
  
     0.771
EDM26039.1
COG2207 AraC-type DNA-binding domain-containing proteins.
  
 
   0.769
EDM28727.1
Hypothetical protein; COG2207 AraC-type DNA-binding domain-containing proteins.
  
     0.768
EDM26464.1
L-rhamnose operon transcriptional activator; COG2207 AraC-type DNA-binding domain-containing proteins.
  
     0.767
EDM28723.1
Transcriptional regulator; COG2207 AraC-type DNA-binding domain-containing proteins.
  
     0.766
EDM28090.1
Probable transcription regulator; COG2207 AraC-type DNA-binding domain-containing proteins.
  
     0.759
EDM26576.1
Probable transcription regulator; COG2202 FOG: PAS/PAC domain.
  
     0.755
EDM28164.1
COG2207 AraC-type DNA-binding domain-containing proteins.
  
     0.720
Your Current Organism:
Lentisphaera araneosa
NCBI taxonomy Id: 313628
Other names: L. araneosa HTCC2155, Lentisphaera araneosa HTCC2155, Lentisphaera araneosa str. HTCC2155, Lentisphaera araneosa strain HTCC2155
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.