STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ELI_00025Putative dolichol-phosphate mannosyltransferase; COG0463 Glycosyltransferases involved in cell wall biogenesis. (374 aa)    
Predicted Functional Partners:
ELI_08330
Putative dolichol monophosphate mannose synthase; COG0463 Glycosyltransferases involved in cell wall biogenesis.
 
 
0.939
ELI_00030
Hypothetical protein; COG0477 Permeases of the major facilitator superfamily.
 
  
 0.913
ELI_00020
Hypothetical protein; COG3307 Lipid A core - O-antigen ligase and related enzymes.
  
  
 0.628
ELI_00035
acyl-CoA dehydrogenase, putative; COG1960 Acyl-CoA dehydrogenases.
       0.498
ELI_12310
Phosphomannomutase; COG1210 UDP-glucose pyrophosphorylase.
  
  
 0.455
ubiG
2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1, 4-benzoquinol methylase; O-methyltransferase that catalyzes the 2 O-methylation steps in the ubiquinone biosynthetic pathway; Belongs to the methyltransferase superfamily. UbiG/COQ3 family.
  
  
 0.455
cysN
Sulfate adenylate transferase, subunit 1/adenylylsulfate kinase; Catalyzes the synthesis of activated sulfate. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily.
  
  
 0.443
polA
DNA polymerase I; In addition to polymerase activity, this DNA polymerase exhibits 5'-3' exonuclease activity; Belongs to the DNA polymerase type-A family.
  
    0.414
ELI_12125
COG0067 Glutamate synthase domain 1.
     
 0.403
Your Current Organism:
Erythrobacter litoralis
NCBI taxonomy Id: 314225
Other names: E. litoralis HTCC2594, Erythrobacter litoralis HTCC2594, Erythrobacter litoralis str. HTCC2594, Erythrobacter litoralis strain HTCC2594
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