STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ELI_03885Cytochrome c biogenesis factor; COG0457 FOG: TPR repeat. (241 aa)    
Predicted Functional Partners:
ELI_03870
COG1138 Cytochrome c biogenesis factor.
  
 
 0.945
ELI_03875
Cytochrome c biogenesis protein; COG0526 Thiol-disulfide isomerase and thioredoxins.
  
  
 0.929
ELI_03880
Cytochrome c biogenesis protein; Possible subunit of a heme lyase.
  
  
 0.906
ccmE
Cytochrome c-type biogenesis protein CcmE; Heme chaperone required for the biogenesis of c-type cytochromes. Transiently binds heme delivered by CcmC and transfers the heme to apo-cytochromes in a process facilitated by CcmF and CcmH. Belongs to the CcmE/CycJ family.
  
  
 0.865
ELI_01830
Hypothetical protein; COG0457 FOG: TPR repeat.
 
 
   0.795
ELI_06335
Hypothetical protein; COG0457 FOG: TPR repeat.
 
 
 0.791
ELI_04980
Hypothetical protein.
  
     0.772
ELI_08845
Hypothetical protein.
  
     0.769
ELI_09170
COG2244 Membrane protein involved in the export of O-antigen and teichoic acid.
 
     0.769
ELI_01575
Hypothetical protein.
 
     0.764
Your Current Organism:
Erythrobacter litoralis
NCBI taxonomy Id: 314225
Other names: E. litoralis HTCC2594, Erythrobacter litoralis HTCC2594, Erythrobacter litoralis str. HTCC2594, Erythrobacter litoralis strain HTCC2594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.