Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ELI_01765 | ELI_01790 | ELI_01765 | ELI_01790 | COG0768 Cell division protein FtsI/penicillin-binding protein 2. | COG0772 Bacterial cell division membrane protein; Belongs to the SEDS family. | 0.978 |
ELI_01765 | ELI_05775 | ELI_01765 | ELI_05775 | COG0768 Cell division protein FtsI/penicillin-binding protein 2. | COG0768 Cell division protein FtsI/penicillin-binding protein 2. | 0.939 |
ELI_01765 | ELI_05785 | ELI_01765 | ELI_05785 | COG0768 Cell division protein FtsI/penicillin-binding protein 2. | Rod shape-determining protein; Involved in formation and maintenance of cell shape. | 0.674 |
ELI_01765 | ELI_05790 | ELI_01765 | ELI_05790 | COG0768 Cell division protein FtsI/penicillin-binding protein 2. | ATPase; COG1077 Actin-like ATPase involved in cell morphogenesis. | 0.631 |
ELI_01765 | ELI_06760 | ELI_01765 | ELI_06760 | COG0768 Cell division protein FtsI/penicillin-binding protein 2. | COG5009 Membrane carboxypeptidase/penicillin-binding protein. | 0.785 |
ELI_01765 | ftsQ | ELI_01765 | ELI_01815 | COG0768 Cell division protein FtsI/penicillin-binding protein 2. | Cell division protein; Essential cell division protein; Belongs to the FtsQ/DivIB family. FtsQ subfamily. | 0.969 |
ELI_01765 | mrdB | ELI_01765 | ELI_05770 | COG0768 Cell division protein FtsI/penicillin-binding protein 2. | Rod shape-determining protein; Peptidoglycan polymerase that is essential for cell wall elongation; Belongs to the SEDS family. MrdB/RodA subfamily. | 0.907 |
ELI_01765 | murE | ELI_01765 | ELI_01770 | COG0768 Cell division protein FtsI/penicillin-binding protein 2. | UDP-N-acetylmuramyl tripeptide synthase; Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan. Belongs to the MurCDEF family. MurE subfamily. | 0.990 |
ELI_01790 | ELI_01765 | ELI_01790 | ELI_01765 | COG0772 Bacterial cell division membrane protein; Belongs to the SEDS family. | COG0768 Cell division protein FtsI/penicillin-binding protein 2. | 0.978 |
ELI_01790 | ELI_05775 | ELI_01790 | ELI_05775 | COG0772 Bacterial cell division membrane protein; Belongs to the SEDS family. | COG0768 Cell division protein FtsI/penicillin-binding protein 2. | 0.792 |
ELI_01790 | ELI_05790 | ELI_01790 | ELI_05790 | COG0772 Bacterial cell division membrane protein; Belongs to the SEDS family. | ATPase; COG1077 Actin-like ATPase involved in cell morphogenesis. | 0.462 |
ELI_01790 | ELI_06760 | ELI_01790 | ELI_06760 | COG0772 Bacterial cell division membrane protein; Belongs to the SEDS family. | COG5009 Membrane carboxypeptidase/penicillin-binding protein. | 0.634 |
ELI_01790 | ftsQ | ELI_01790 | ELI_01815 | COG0772 Bacterial cell division membrane protein; Belongs to the SEDS family. | Cell division protein; Essential cell division protein; Belongs to the FtsQ/DivIB family. FtsQ subfamily. | 0.974 |
ELI_01790 | murE | ELI_01790 | ELI_01770 | COG0772 Bacterial cell division membrane protein; Belongs to the SEDS family. | UDP-N-acetylmuramyl tripeptide synthase; Catalyzes the addition of meso-diaminopimelic acid to the nucleotide precursor UDP-N-acetylmuramoyl-L-alanyl-D-glutamate (UMAG) in the biosynthesis of bacterial cell-wall peptidoglycan. Belongs to the MurCDEF family. MurE subfamily. | 0.928 |
ELI_05775 | ELI_01765 | ELI_05775 | ELI_01765 | COG0768 Cell division protein FtsI/penicillin-binding protein 2. | COG0768 Cell division protein FtsI/penicillin-binding protein 2. | 0.939 |
ELI_05775 | ELI_01790 | ELI_05775 | ELI_01790 | COG0768 Cell division protein FtsI/penicillin-binding protein 2. | COG0772 Bacterial cell division membrane protein; Belongs to the SEDS family. | 0.792 |
ELI_05775 | ELI_05780 | ELI_05775 | ELI_05780 | COG0768 Cell division protein FtsI/penicillin-binding protein 2. | Hypothetical protein. | 0.820 |
ELI_05775 | ELI_05785 | ELI_05775 | ELI_05785 | COG0768 Cell division protein FtsI/penicillin-binding protein 2. | Rod shape-determining protein; Involved in formation and maintenance of cell shape. | 0.975 |
ELI_05775 | ELI_05790 | ELI_05775 | ELI_05790 | COG0768 Cell division protein FtsI/penicillin-binding protein 2. | ATPase; COG1077 Actin-like ATPase involved in cell morphogenesis. | 0.971 |
ELI_05775 | ELI_06760 | ELI_05775 | ELI_06760 | COG0768 Cell division protein FtsI/penicillin-binding protein 2. | COG5009 Membrane carboxypeptidase/penicillin-binding protein. | 0.708 |
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