Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
ELI_00315 | ELI_05925 | ELI_00315 | ELI_05925 | COG1680 Beta-lactamase class C and other penicillin binding proteins. | COG3876 Uncharacterized protein conserved in bacteria. | 0.480 |
ELI_01580 | ELI_05925 | ELI_01580 | ELI_05925 | Glycosyl hydrolase; COG1472 Beta-glucosidase-related glycosidases. | COG3876 Uncharacterized protein conserved in bacteria. | 0.598 |
ELI_05905 | ELI_05910 | ELI_05905 | ELI_05910 | Probable transmembrane protein; COG0477 Permeases of the major facilitator superfamily. | Hypothetical protein. | 0.708 |
ELI_05905 | ELI_05920 | ELI_05905 | ELI_05920 | Probable transmembrane protein; COG0477 Permeases of the major facilitator superfamily. | Hypothetical protein. | 0.402 |
ELI_05905 | ELI_05925 | ELI_05905 | ELI_05925 | Probable transmembrane protein; COG0477 Permeases of the major facilitator superfamily. | COG3876 Uncharacterized protein conserved in bacteria. | 0.400 |
ELI_05905 | tyrS | ELI_05905 | ELI_05915 | Probable transmembrane protein; COG0477 Permeases of the major facilitator superfamily. | tyrosyl-tRNA synthetase; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two- step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tRNA(Tyr); Belongs to the class-I aminoacyl-tRNA synthetase family. TyrS type 1 subfamily. | 0.493 |
ELI_05910 | ELI_05905 | ELI_05910 | ELI_05905 | Hypothetical protein. | Probable transmembrane protein; COG0477 Permeases of the major facilitator superfamily. | 0.708 |
ELI_05910 | ELI_05920 | ELI_05910 | ELI_05920 | Hypothetical protein. | Hypothetical protein. | 0.463 |
ELI_05910 | ELI_05925 | ELI_05910 | ELI_05925 | Hypothetical protein. | COG3876 Uncharacterized protein conserved in bacteria. | 0.463 |
ELI_05910 | tyrS | ELI_05910 | ELI_05915 | Hypothetical protein. | tyrosyl-tRNA synthetase; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two- step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tRNA(Tyr); Belongs to the class-I aminoacyl-tRNA synthetase family. TyrS type 1 subfamily. | 0.596 |
ELI_05920 | ELI_05905 | ELI_05920 | ELI_05905 | Hypothetical protein. | Probable transmembrane protein; COG0477 Permeases of the major facilitator superfamily. | 0.402 |
ELI_05920 | ELI_05910 | ELI_05920 | ELI_05910 | Hypothetical protein. | Hypothetical protein. | 0.463 |
ELI_05920 | ELI_05925 | ELI_05920 | ELI_05925 | Hypothetical protein. | COG3876 Uncharacterized protein conserved in bacteria. | 0.953 |
ELI_05920 | tyrS | ELI_05920 | ELI_05915 | Hypothetical protein. | tyrosyl-tRNA synthetase; Catalyzes the attachment of tyrosine to tRNA(Tyr) in a two- step reaction: tyrosine is first activated by ATP to form Tyr-AMP and then transferred to the acceptor end of tRNA(Tyr); Belongs to the class-I aminoacyl-tRNA synthetase family. TyrS type 1 subfamily. | 0.637 |
ELI_05925 | ELI_00315 | ELI_05925 | ELI_00315 | COG3876 Uncharacterized protein conserved in bacteria. | COG1680 Beta-lactamase class C and other penicillin binding proteins. | 0.480 |
ELI_05925 | ELI_01580 | ELI_05925 | ELI_01580 | COG3876 Uncharacterized protein conserved in bacteria. | Glycosyl hydrolase; COG1472 Beta-glucosidase-related glycosidases. | 0.598 |
ELI_05925 | ELI_05905 | ELI_05925 | ELI_05905 | COG3876 Uncharacterized protein conserved in bacteria. | Probable transmembrane protein; COG0477 Permeases of the major facilitator superfamily. | 0.400 |
ELI_05925 | ELI_05910 | ELI_05925 | ELI_05910 | COG3876 Uncharacterized protein conserved in bacteria. | Hypothetical protein. | 0.463 |
ELI_05925 | ELI_05920 | ELI_05925 | ELI_05920 | COG3876 Uncharacterized protein conserved in bacteria. | Hypothetical protein. | 0.953 |
ELI_05925 | ELI_07345 | ELI_05925 | ELI_07345 | COG3876 Uncharacterized protein conserved in bacteria. | Peptidase U61, LD-carboxypeptidase A; COG1619 Uncharacterized proteins, homologs of microcin C7 resistance protein MccF. | 0.428 |
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