STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ELI_06170Hypothetical protein. (1684 aa)    
Predicted Functional Partners:
ELI_06180
COG4719 Uncharacterized protein conserved in bacteria.
 
     0.884
ELI_06165
Hypothetical protein.
 
     0.883
ELI_06185
Hypothetical protein.
 
     0.873
ELI_07050
Hypothetical protein; COG1988 Predicted membrane-bound metal-dependent hydrolases.
  
   
 0.713
ELI_01455
COG1629 Outer membrane receptor proteins, mostly Fe transport.
   
 
 0.712
ELI_01925
Hypothetical protein; COG0489 ATPases involved in chromosome partitioning.
  
     0.695
ELI_08265
COG4961 Flp pilus assembly protein TadG.
  
     0.693
ELI_09840
Hypothetical protein; COG5295 Autotransporter adhesin.
  
     0.644
ELI_12575
COG4704 Uncharacterized protein conserved in bacteria.
  
     0.642
ELI_06175
Hypothetical protein.
       0.641
Your Current Organism:
Erythrobacter litoralis
NCBI taxonomy Id: 314225
Other names: E. litoralis HTCC2594, Erythrobacter litoralis HTCC2594, Erythrobacter litoralis str. HTCC2594, Erythrobacter litoralis strain HTCC2594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.