STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ELI_08585Hypothetical protein. (198 aa)    
Predicted Functional Partners:
ELI_08590
COG1651 Protein-disulfide isomerase.
 
     0.898
ELI_08845
Hypothetical protein.
  
     0.746
ELI_08595
COG1651 Protein-disulfide isomerase.
 
     0.744
ELI_08580
Hypothetical protein; Adenine glycosylase active on G-A mispairs.
       0.707
ELI_04980
Hypothetical protein.
  
     0.701
ELI_12165
Hypothetical protein.
  
     0.697
lptD
Organic solvent tolerance protein; Involved in the assembly of lipopolysaccharide (LPS) at the surface of the outer membrane; Belongs to the LptD family.
  
     0.696
ELI_05065
Helicase; COG3893 Inactivated superfamily I helicase.
  
     0.667
ELI_06335
Hypothetical protein; COG0457 FOG: TPR repeat.
  
     0.658
ELI_07085
Hypothetical protein; COG0457 FOG: TPR repeat.
  
     0.655
Your Current Organism:
Erythrobacter litoralis
NCBI taxonomy Id: 314225
Other names: E. litoralis HTCC2594, Erythrobacter litoralis HTCC2594, Erythrobacter litoralis str. HTCC2594, Erythrobacter litoralis strain HTCC2594
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.